Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | ALO56_03131 | Not Available | Positive | 5237104 - 5237841 | 26537.1 |
| uncharacterized protein | ALO56_03132 | Q87AD4 | Positive | 5237962 - 5238396 | 14756.4 |
| uncharacterized protein | ALO56_03133 | Q87AD3 | Positive | 5238399 - 5238818 | 14805.8 |
| uncharacterized protein | ALO56_04995 | Not Available | Negative | 5238834 - 5239709 | 31736.5 |
| tonb system transport protein exbb1 | ALO56_04996 | Q05605 | Positive | 5239803 - 5240846 | 36605.6 |
| biopolymer transport protein exbd | ALO56_03136 | Q05606 | Positive | 5240850 - 5241275 | 15417.9 |
| tonb protein | ALO56_03137 | Q05613 | Positive | 5241272 - 5242024 | 27165.1 |
| oxidative stress regulatory protein oxyr | ALO56_03138 | Q9X725 | Positive | 5242117 - 5243040 | 33656.8 |
| atp-dependent dna helicase recg | ALO56_03139 | Q8XD86 | Positive | 5243052 - 5245127 | 76135.6 |
| uncharacterized protein | ALO56_03140 | Not Available | Positive | 5245214 - 5245711 | 18133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









