Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03121 | Not Available | Negative | 5228935 - 5229507 | 20963.0 |
| orotate phosphoribosyltransferase | ALO56_03122 | Q4ZZY3 | Negative | 5229581 - 5230222 | 22967.5 |
| exodeoxyribonuclease iii | ALO56_03123 | P37454 | Positive | 5230304 - 5231083 | 29840.4 |
| uncharacterized protein | ALO56_03124 | Not Available | Negative | 5231153 - 5231527 | 13731.2 |
| ribonuclease ph | ALO56_03125 | Q4ZZY6 | Negative | 5231540 - 5232262 | 25705.0 |
| uncharacterized protein | ALO56_03126 | P44726 | Positive | 5232569 - 5233432 | 32118.6 |
| guanylate kinase | ALO56_03127 | Q88BE2 | Positive | 5233446 - 5234066 | 23514.6 |
| dna-directed rna polymerase subunit omega | ALO56_03128 | Q48Q16 | Positive | 5234214 - 5234477 | 9678.46 |
| rela/spot protein | ALO56_03129 | P0AG25 | Positive | 5234538 - 5236643 | 78515.2 |
| endoribonuclease l-psp | ALO56_03130 | P40431 | Positive | 5236669 - 5237049 | 13400.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









