Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | ALO56_04992 | Q4ZZW2 | Negative | 5207625 - 5208698 | 38622.6 |
| endoribonuclease l-psp | ALO56_03104 | Not Available | Negative | 5208771 - 5209124 | 12830.5 |
| d-amino acid dehydrogenase small subunit | ALO56_03105 | Q48PZ1 | Negative | 5209096 - 5210397 | 47131.7 |
| leucine-responsive regulatory protein | ALO56_03106 | P0ACJ2 | Positive | 5210555 - 5211043 | 18688.8 |
| uncharacterized protein family | ALO56_03107 | Not Available | Negative | 5211053 - 5211460 | 15124.5 |
| uncharacterized protein | ALO56_04993 | Not Available | Positive | 5211513 - 5212826 | 47540.2 |
| gntr family transcriptional regulator/aminotransferase, s i | ALO56_03108 | P39389 | Positive | 5213454 - 5214935 | 54847.7 |
| phospholipase d | ALO56_03109 | P75919 | Positive | 5214995 - 5216587 | 59375.9 |
| uncharacterized protein | ALO56_04994 | Not Available | Negative | 5216584 - 5217729 | 39760.1 |
| aldehyde dehydrogenase | ALO56_03110 | P23883 | Negative | 5217947 - 5219518 | 55734.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









