Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02901 | Not Available | Positive | 5200967 - 5201287 | 11261.3 |
| hypothetical protein | ALO56_100117 | Not Available | Positive | 5201284 - 5203245 | 73213.1 |
| uncharacterized protein | ALO56_02902 | Not Available | Negative | 5203246 - 5203623 | 14168.5 |
| uncharacterized protein | ALO56_02903 | Not Available | Negative | 5203792 - 5204232 | 14942.9 |
| hu family dna-binding protein | ALO56_02904 | Q9HTL0 | Negative | 5204501 - 5204800 | 10666.9 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALO56_02905 | Q9HTK9 | Negative | 5204989 - 5205567 | 19911.4 |
| fructokinase | ALO56_04727 | Not Available | Negative | 5205583 - 5205930 | 12751.2 |
| hypothetical protein | ALO56_200142 | Not Available | Negative | 5205965 - 5206123 | 5850.64 |
| cytochrome c5 | ALO56_03101 | P00121 | Negative | 5206335 - 5206757 | 14301.2 |
| helix-hairpin-helix dna-binding motif-containing protein | ALO56_03102 | Not Available | Negative | 5206941 - 5207489 | 19951.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









