Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine dehydratase/bile acid-inducible protein f | ALO56_02892 | Q7CXU0 | Negative | 5190886 - 5192106 | 43488.1 |
| glutaryl-coa dehydrogenase | ALO56_02893 | Q54R47 | Negative | 5192119 - 5193300 | 43182.9 |
| lysr family transcriptional regulator | ALO56_02894 | Not Available | Positive | 5193455 - 5194363 | 34270.1 |
| nad transhydrogenase subunit alpha | ALO56_02895 | P07001 | Positive | 5194790 - 5195371 | 20488.8 |
| nad transhydrogenase subunit alpha | ALO56_02896 | Q2RSB3 | Positive | 5195906 - 5196229 | 11452.6 |
| nad transhydrogenase subunit beta | ALO56_100142 | Q2RSB4 | Positive | 5196226 - 5197680 | 50512.7 |
| succinate coa transferase | ALO56_02897 | P38946 | Positive | 5197861 - 5199354 | 54172.1 |
| uncharacterized protein | ALO56_02898 | Not Available | Positive | 5199675 - 5199890 | 8243.88 |
| uncharacterized protein | ALO56_02899 | Not Available | Positive | 5200210 - 5200530 | 10795.7 |
| uncharacterized protein | ALO56_02900 | Not Available | Positive | 5200614 - 5200928 | 11121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









