Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comf | ALO56_00128 | P46846 | Negative | 5180287 - 5181027 | 27923.2 |
| biotin synthase | ALO56_00129 | Q88A98 | Positive | 5181119 - 5182177 | 38512.2 |
| 8-amino-7-oxononanoate synthase | ALO56_00130 | Q48CS2 | Positive | 5182198 - 5183388 | 42873.5 |
| bioh protein | ALO56_00131 | C5BMZ8 | Positive | 5183381 - 5184124 | 26521.5 |
| malonyl- o-methyltransferase | ALO56_00132 | A6UYW3 | Positive | 5184117 - 5184926 | 29374.0 |
| atp-dependent dethiobiotin synthetase biod | ALO56_00133 | A6UYW4 | Positive | 5184960 - 5185643 | 23611.6 |
| uncharacterized protein | ALO56_00134 | Not Available | Positive | 5185794 - 5186090 | 10429.2 |
| acyl-coa dehydrogenase | ALO56_00135 | Not Available | Positive | 5186424 - 5188229 | 65491.6 |
| diguanylate cye | ALO56_00136 | Q9KKZ4 | Positive | 5188643 - 5189992 | 50252.5 |
| acyl-coa dehydrogenase | ALO56_04359 | Q0AVM4 | Positive | 5190098 - 5190645 | 19906.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









