Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | ALO56_02169 | Q48F14 | Negative | 5160175 - 5161392 | 45315.1 |
| ompa/motb | ALO56_02170 | Not Available | Negative | 5161525 - 5162427 | 33199.6 |
| hypothetical protein | ALO56_100549 | Not Available | Negative | 5162409 - 5162648 | 9159.1 |
| dihydroorotase | ALO56_100187 | Q48F12 | Positive | 5162553 - 5163617 | 39042.7 |
| ribonuclease t | ALO56_02171 | Q48F11 | Positive | 5163614 - 5164294 | 24642.9 |
| bacterioferritin-associated ferredoxin | ALO56_100173 | Not Available | Positive | 5164489 - 5164707 | 7767.33 |
| bacterioferritin | ALO56_02172 | P22759 | Positive | 5164908 - 5165378 | 17832.6 |
| glutaredoxin | ALO56_02173 | P0AC71 | Negative | 5165496 - 5165822 | 11678.1 |
| molybdopterin oxidoreductase | ALO56_04826 | P07658 | Negative | 5165911 - 5168070 | 79023.6 |
| hypothetical protein | ALO56_100345 | Not Available | Negative | 5168151 - 5168474 | 11911.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









