Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | ALO56_02159 | P0A106 | Positive | 5150627 - 5150836 | 7727.11 |
| para family protein | ALO56_02160 | P72190 | Negative | 5150969 - 5152063 | 38705.8 |
| methionine--trna ligase | ALO56_02161 | Q87XN0 | Positive | 5152239 - 5154281 | 75336.8 |
| iron-sulfur cluster-binding protein | ALO56_02162 | Q2SKU5 | Positive | 5154395 - 5155435 | 36876.5 |
| endonuclease iii | ALO56_02163 | P0AB84 | Positive | 5155541 - 5156179 | 23803.8 |
| uncharacterized protein | ALO56_02164 | Not Available | Positive | 5156285 - 5156467 | 6911.98 |
| luxr family transcriptional regulator | ALO56_02165 | Not Available | Negative | 5156617 - 5157285 | 24524.5 |
| uncharacterized protein | ALO56_02166 | Not Available | Positive | 5158503 - 5159030 | 19369.2 |
| uncharacterized protein | ALO56_02167 | Not Available | Positive | 5159299 - 5159736 | 16668.2 |
| uncharacterized protein | ALO56_02168 | Not Available | Positive | 5159818 - 5160093 | 10571.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









