Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | ALO56_100555 | Not Available | Negative | 462764 - 463444 | 24706.3 |
| short chain dehydrogenase | ALO56_00765 | Not Available | Negative | 463495 - 464094 | 20928.3 |
| lysr family transcriptional regulator | ALO56_00766 | A0A0H2ZDG9 | Positive | 464199 - 465110 | 34277.2 |
| abc transporter | ALO56_04494 | Not Available | Negative | 465265 - 465966 | 25770.5 |
| leucine/isoleucine/valine transporter atp-binding subunit | ALO56_00768 | P21629 | Negative | 465967 - 466734 | 28218.4 |
| leucine/isoleucine/valine transporter permease subunit | ALO56_00769 | P21628 | Negative | 466731 - 467996 | 45963.9 |
| high-affinity branched-chain amino acid abc transporter permease | ALO56_00770 | Not Available | Negative | 467993 - 468916 | 32213.5 |
| leucine abc transporter subunit substrate-binding protein livk | ALO56_04495 | P21175 | Negative | 469128 - 470513 | 49468.2 |
| uncharacterized protein | ALO56_00772 | Not Available | Positive | 470582 - 470887 | 11022.3 |
| diguanylate cye | ALO56_100032 | Not Available | Negative | 471011 - 473326 | 85390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









