Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--trna ligase | ALO56_04200 | Q87YQ1 | Negative | 5105364 - 5107058 | 64552.1 |
| peptidyl-prolyl cis-trans isomerase | ALO56_04201 | P83221 | Positive | 5107267 - 5107770 | 18218.7 |
| udp-2,3-diacylglucosamine hydrolase | ALO56_100105 | Q4ZVP2 | Positive | 5107767 - 5108528 | 28723.1 |
| drug resistance transporter, emrb/qaca family protein | ALO56_04202 | P0AEJ1 | Negative | 5108702 - 5110240 | 55471.6 |
| multidrug resistance protein | ALO56_04203 | P27303 | Negative | 5110304 - 5111536 | 43886.1 |
| marr family transcriptional regulator | ALO56_04204 | P27245 | Negative | 5111597 - 5112082 | 18125.0 |
| pp_04286 | ALO56_04205 | Not Available | Negative | 5112241 - 5112852 | Not Available |
| uncharacterized protein | ALO56_04206 | Not Available | Negative | 5112935 - 5113405 | 18343.3 |
| aconitate hydratase 2 | ALO56_05210 | Q9I2V5 | Positive | 5113702 - 5116407 | 97587.0 |
| gntr family transcriptional regulator | ALO56_04208 | Q01856 | Negative | 5116652 - 5117983 | 47800.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









