Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease ybey | ALO56_00336 | Q87VX9 | Negative | 5090069 - 5090566 | 18803.8 |
| 17 kda surface antigen | ALO56_01878 | Not Available | Negative | 5091317 - 5091841 | 17405.4 |
| oxidoreductase alpha subunit | ALO56_01879 | Q8XAX1 | Negative | 5091997 - 5094333 | 86012.9 |
| formate dehydrogenase accessory protein fdhd | ALO56_01880 | Q7WMS0 | Negative | 5094330 - 5095166 | 29751.9 |
| regulatory protein lysr | ALO56_01881 | P0ACQ6 | Negative | 5095270 - 5096151 | 32625.5 |
| lysm domain/bon superfamily protein | ALO56_01882 | P0ADE7 | Positive | 5096303 - 5096749 | 16070.2 |
| pyoverdine sidechain non-ribosomal peptide synthetase module iv | ALO56_100431 | Not Available | Positive | 5096894 - 5098513 | 59275.4 |
| hypothetical protein | ALO56_04549 | Not Available | Negative | 5098661 - 5101153 | 91298.8 |
| hypothetical protein | ALO56_04550 | Q08017 | Negative | 5101411 - 5103657 | 81709.1 |
| cysteine--trna ligase | ALO56_05206 | Q48L06 | Negative | 5104062 - 5105442 | 51601.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









