Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00326 | Not Available | Negative | 5078517 - 5079923 | 51705.1 |
| uncharacterized protein | ALO56_00327 | Not Available | Negative | 5079972 - 5080337 | 12675.4 |
| uncharacterized protein | ALO56_00328 | Not Available | Negative | 5080429 - 5080890 | 16789.6 |
| uncharacterized protein | ALO56_00329 | Not Available | Negative | 5081505 - 5081711 | 7943.77 |
| dna polymerase iii subunit delta | ALO56_00330 | Not Available | Negative | 5081716 - 5082753 | 37376.2 |
| lps-assembly lipoprotein lpte | ALO56_00331 | Not Available | Negative | 5082795 - 5083400 | 22117.2 |
| leucine--trna ligase | ALO56_00332 | Q48DN1 | Negative | 5083488 - 5086094 | 97110.7 |
| uncharacterized protein | ALO56_00333 | P44292 | Positive | 5086859 - 5087620 | 27628.0 |
| apolipoprotein n-acyltransferase | ALO56_00334 | Q87VX7 | Negative | 5087669 - 5089189 | 55661.3 |
| metal ion transporter | ALO56_00335 | Q9KTE3 | Negative | 5089221 - 5090063 | 31505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









