Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200004 | P15939 | Positive | 5057547 - 5058611 | 37831.6 |
| hypothetical protein | ALO56_200168 | P15940 | Positive | 5058611 - 5059249 | 23275.3 |
| hypothetical protein | ALO56_200000 | Q8Y7I6 | Negative | 5059351 - 5061234 | 69479.2 |
| hypothetical protein | ALO56_200203 | Not Available | Negative | 5061506 - 5062834 | 49876.5 |
| hypothetical protein | ALO56_200037 | Not Available | Negative | 5062845 - 5064146 | 47283.1 |
| branched-chain amino acid abc transporter atp-binding protein | ALO56_00322 | O28881 | Negative | 5064814 - 5065674 | 31014.2 |
| branched-chain amino acid abc transporter permease | ALO56_00323 | Not Available | Negative | 5065671 - 5066750 | 38875.7 |
| inner-membrane translocator | ALO56_00324 | Not Available | Negative | 5066750 - 5068339 | 56299.7 |
| branched-chain amino acid abc transporter, periplasmic amino acid-binding protein | ALO56_04408 | Not Available | Negative | 5068676 - 5070076 | 51061.2 |
| hypothetical protein | ALO56_00325 | Not Available | Positive | 5070632 - 5078227 | 280855.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









