Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate-specific porin protein kdgm | ALO56_00176 | Q934G3 | Positive | 451603 - 452325 | 28262.9 |
| unknown protein sequence | ALO56_00757 | Not Available | Positive | 452491 - 452694 | 7252.43 |
| uncharacterized protein | ALO56_00758 | Not Available | Negative | 452788 - 453252 | 17154.8 |
| atp-dependent dna helicase ding | ALO56_00759 | P29741 | Positive | 453359 - 455503 | 78844.3 |
| carboxylesterase | ALO56_00760 | Q09621 | Positive | 455622 - 456770 | 41263.1 |
| ompa family protein | ALO56_00761 | Not Available | Positive | 456926 - 458071 | 39834.5 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ALO56_00762 | Q48LQ7 | Positive | 458206 - 458853 | 24817.2 |
| 17 kda surface antigen | ALO56_00763 | Not Available | Positive | 459001 - 459465 | 15768.9 |
| na antiporter nhaa | ALO56_100687 | Q3KGX9 | Negative | 459535 - 460719 | 41246.1 |
| uncharacterized protein | ALO56_04492 | Q05627 | Negative | 460998 - 462623 | 59010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









