Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase | ALO56_00983 | S5FMM4 | Positive | 5001184 - 5002401 | 42675.1 |
| spermidine/putrescine-binding periplasmic protein | ALO56_100764 | Not Available | Positive | 5002230 - 5003450 | 44425.8 |
| hypothetical protein | ALO56_200070 | P05846 | Positive | 5003590 - 5005050 | 54407.7 |
| hypothetical protein | ALO56_200180 | Not Available | Positive | 5005066 - 5006760 | 62623.2 |
| hypothetical protein | ALO56_200159 | P55530 | Positive | 5007421 - 5008404 | 37063.9 |
| hypothetical protein | ALO56_200204 | P55381 | Positive | 5008428 - 5010842 | 90294.7 |
| hypothetical protein | ALO56_200012 | Not Available | Negative | 5011412 - 5011612 | 7583.35 |
| hypothetical protein | ALO56_200164 | Q93TE2 | Positive | 5011658 - 5012041 | 13339.8 |
| hypothetical protein | ALO56_200098 | Not Available | Positive | 5012052 - 5012267 | 8012.77 |
| hypothetical protein | ALO56_200141 | Not Available | Negative | 5012588 - 5014216 | 58179.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









