Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00973 | Not Available | Positive | 4991833 - 4992060 | 8415.27 |
| uncharacterized protein | ALO56_00974 | O31185 | Positive | 4992118 - 4992816 | 24776.2 |
| methyltransferase | ALO56_00975 | Q2SCH1 | Positive | 4992865 - 4993827 | 36349.6 |
| methyl-accepting chemotaxis protein | ALO56_00976 | G3XDA3 | Negative | 4993864 - 4995516 | 59218.6 |
| iclr family transcriptional regulator | ALO56_00977 | Not Available | Negative | 4995723 - 4996574 | 30847.1 |
| abc transporter atp-binding protein | ALO56_00978 | Q47T99 | Positive | 4996726 - 4997832 | 40343.9 |
| abc transporter permease | ALO56_00979 | P0A2J8 | Positive | 4997829 - 4998701 | 31811.3 |
| binding-protein dependent transport system inner membrane protein | ALO56_00980 | P0AFL2 | Positive | 4998705 - 4999499 | 28720.9 |
| uncharacterized protein | ALO56_00981 | Not Available | Positive | 4999521 - 4999829 | 10977.2 |
| pyridine nucleotide-disulfide oxidoreductase | ALO56_00982 | P72300 | Positive | 4999826 - 5001187 | 49105.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









