Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpb protein | ALO56_00963 | Q9I742 | Negative | 4975473 - 4978085 | 95753.4 |
| uncharacterized protein | ALO56_00964 | Q9I744 | Negative | 4979066 - 4980853 | 67320.5 |
| uncharacterized protein | ALO56_00965 | Not Available | Negative | 4980961 - 4981371 | 15420.6 |
| uncharacterized protein | ALO56_00966 | Q9I748 | Negative | 4981368 - 4982843 | 55728.9 |
| uncharacterized protein | ALO56_00967 | Not Available | Positive | 4986289 - 4987524 | 46723.1 |
| acetyltransferase | ALO56_00968 | Not Available | Positive | 4987649 - 4988224 | 21538.0 |
| uncharacterized protein | ALO56_00969 | Not Available | Negative | 4988332 - 4988604 | 10512.4 |
| transporter | ALO56_04543 | P0AEC2 | Negative | 4988762 - 4990330 | 57835.6 |
| uncharacterized protein | ALO56_00971 | Not Available | Positive | 4990964 - 4991242 | 10475.7 |
| peptidyl-prolyl cis-trans isomerase | ALO56_00972 | Q6BX45 | Positive | 4991362 - 4991703 | 12288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









