Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | ALO56_100338 | P22805 | Positive | 4940825 - 4942237 | 53042.6 |
| ribosomal rna small subunit methyltransferase e | ALO56_01499 | P37995 | Positive | 4942394 - 4942822 | 16145.4 |
| uncharacterized protein | ALO56_04666 | Not Available | Negative | 4943112 - 4943414 | 11004.2 |
| hylii protein | ALO56_01500 | P54176 | Negative | 4943841 - 4944455 | 22609.4 |
| malonate utilization transcriptional regulator | ALO56_04667 | P52684 | Positive | 4944565 - 4945539 | 36369.1 |
| malonate transporter subunit madm | ALO56_04668 | Not Available | Negative | 4945586 - 4946350 | 25606.1 |
| malonate transporter, madl subunit | ALO56_100810 | Not Available | Negative | 4946356 - 4946751 | 13414.1 |
| malonyl coa-acyl carrier protein transacylase | ALO56_01503 | P43712 | Negative | 4946824 - 4947756 | 32824.5 |
| malonate decarboxylase subunit gamma | ALO56_01504 | O06927 | Negative | 4948385 - 4949185 | 28360.0 |
| malonate decarboxylase subunit beta | ALO56_01505 | O06926 | Negative | 4949182 - 4950033 | 29947.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









