Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolysaccharide biosynthesis protein | ALO56_01467 | Not Available | Positive | 4926497 - 4928488 | 74636.9 |
| group 1 glycosyl transferase | ALO56_01468 | Not Available | Positive | 4928488 - 4929666 | 43139.6 |
| glycosyl hydrolase | ALO56_01469 | Not Available | Positive | 4929668 - 4930981 | 48339.6 |
| glycosyl transferase, group 1 family protein pslh | ALO56_01470 | Not Available | Positive | 4930984 - 4932207 | 46151.3 |
| group 1 glycosyl transferase | ALO56_01471 | Not Available | Positive | 4932191 - 4933291 | 41094.3 |
| membrane protein pslj | ALO56_01472 | Not Available | Positive | 4933291 - 4934706 | 51264.0 |
| transferase, hexapeptide repeat protein | ALO56_01473 | Not Available | Positive | 4934703 - 4935524 | 30494.2 |
| membrane protein pslk | ALO56_01474 | B4E9G3 | Positive | 4935539 - 4936957 | 49542.5 |
| hypothetical protein | ALO56_01498 | Q87V70 | Negative | 4937290 - 4937895 | 21596.5 |
| putative cytochrome | ALO56_100993 | P75925 | Negative | 4937896 - 4938444 | 20122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









