Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 4914471 - 4914546 | Not Available |
| glutamate--trna ligase | ALO56_04664 | Q884C8 | Negative | 4914734 - 4916251 | 57827.1 |
| mosc domain-containing protein | ALO56_01459 | P75863 | Negative | 4916429 - 4917283 | 31775.3 |
| chemotaxis protein chev | ALO56_01460 | Not Available | Negative | 4917332 - 4918261 | 34480.4 |
| uncharacterized protein | ALO56_01461 | Not Available | Positive | 4918840 - 4919271 | 15725.5 |
| histidine kinase, dimerization and phosphoacceptor region | ALO56_01462 | P09835 | Positive | 4919656 - 4920561 | 33440.5 |
| luxr family transcriptional regulator | ALO56_01463 | P13800 | Positive | 4920558 - 4921220 | 24314.9 |
| capsular polysaccharide biosynthesis protein psla | ALO56_01464 | Not Available | Positive | 4922656 - 4924092 | 54345.1 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | ALO56_01465 | P0C7J3 | Positive | 4924092 - 4925549 | 53719.3 |
| polysaccharide biosynthesis/export protein | ALO56_01466 | Not Available | Positive | 4925703 - 4926479 | 27510.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









