Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | ALO56_01451 | Q48K98 | Negative | 4906462 - 4907103 | 24153.5 |
| 3-isopropylmalate dehydratase large subunit | ALO56_01452 | Q4ZUZ6 | Negative | 4907114 - 4908538 | 51034.1 |
| regulatory protein lysr | ALO56_04662 | P96194 | Positive | 4908653 - 4909540 | 32755.8 |
| pas:ggdef-like protein | ALO56_01454 | Not Available | Positive | 4909633 - 4911831 | 81590.8 |
| heat shock protein hsp20 | ALO56_01455 | P96193 | Negative | 4911875 - 4912318 | 16601.5 |
| pp_04129 | ALO56_01456 | Not Available | Negative | 4912420 - 4913400 | Not Available |
| uncharacterized protein | ALO56_01457 | Not Available | Negative | 4913430 - 4913951 | 19476.1 |
| Trna-glu | Not Available | Not Available | Positive | 4914070 - 4914145 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4914191 - 4914266 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4914319 - 4914394 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









