Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ALO56_04658 | Not Available | Negative | 4895668 - 4896648 | 35768.4 |
| oxidoreductase zinc-binding protein | ALO56_01442 | P75691 | Positive | 4896754 - 4897806 | 37686.4 |
| iclr family transcriptional regulator | ALO56_01443 | Not Available | Negative | 4897808 - 4898620 | 29523.7 |
| d-galactonate transporter | ALO56_04660 | P0AA77 | Negative | 4898686 - 4900056 | 50006.9 |
| galactonate dehydratase | ALO56_01445 | Q6CYT9 | Negative | 4900108 - 4901256 | 42337.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | ALO56_01446 | Q92RN8 | Negative | 4901318 - 4901947 | 21822.7 |
| 2-keto-3-deoxy-galactonokinase | ALO56_01447 | Q92RN7 | Negative | 4901949 - 4902953 | 35701.6 |
| aspartate-semialdehyde dehydrogenase | ALO56_01448 | Q51344 | Negative | 4903132 - 4904244 | 40485.2 |
| 3-isopropylmalate dehydrogenase | ALO56_04661 | Q48K97 | Negative | 4904315 - 4905409 | 39355.6 |
| ubie/coq5 family methyltransferase | ALO56_01450 | P30866 | Negative | 4905465 - 4906229 | 27992.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









