Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ALO56_04551 | Not Available | Negative | 439328 - 440155 | 30715.0 |
| dihydroxy-acid dehydratase | ALO56_04552 | Q1JUQ1 | Negative | 440163 - 441908 | 62328.1 |
| major facilitator family transporter | ALO56_00995 | P0DPR4 | Positive | 442121 - 443434 | 47815.6 |
| sugar transporter | ALO56_00996 | Not Available | Positive | 443468 - 444460 | 36334.8 |
| mandelate racemase/muconate lactonizing protein | ALO56_00170 | A9CEQ8 | Positive | 444987 - 446141 | 42474.6 |
| dipeptide abc transporter, periplasmic dipeptide-binding protein | ALO56_00171 | P33950 | Positive | 446234 - 447856 | 60134.4 |
| abc transporter permease | ALO56_00172 | Not Available | Positive | 447898 - 448935 | 37638.6 |
| dipeptide abc transporter, permease protein dppc | ALO56_00173 | Not Available | Positive | 448935 - 449840 | 32160.0 |
| dipeptide abc transporter atp-binding protein | ALO56_00174 | Q8VQK6 | Positive | 449861 - 450700 | 31277.3 |
| dipeptide abc transporter atp-binding protein | ALO56_00175 | P18766 | Positive | 450711 - 451475 | 28171.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









