Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | ALO56_01434 | P14165 | Positive | 4884690 - 4885979 | 47616.7 |
| collagenase and related protease | ALO56_100152 | Q9I3D8 | Negative | 4886049 - 4886717 | 24456.3 |
| proteinase inhibitor | ALO56_100451 | P58040 | Negative | 4886710 - 4886967 | 8922.86 |
| uncharacterized protein | ALO56_01435 | Not Available | Negative | 4887059 - 4887718 | 23406.3 |
| regulatory protein, gntr | ALO56_04654 | Not Available | Negative | 4887831 - 4889312 | 54927.6 |
| ompa family protein | ALO56_01437 | P22263 | Negative | 4889595 - 4890410 | 30161.9 |
| lipoprotein | ALO56_01438 | Not Available | Negative | 4890407 - 4890766 | 13115.6 |
| uncharacterized protein | ALO56_04656 | Not Available | Negative | 4890769 - 4891611 | 30456.7 |
| electron transfer flavoprotein subunit alpha | ALO56_01439 | Q9HZP7 | Negative | 4891732 - 4892661 | 31353.4 |
| electron-transferring-flavoprotein dehydrogenase | ALO56_01440 | Q9HZP5 | Positive | 4893950 - 4895605 | 60419.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









