Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system ii carrier protein | ALO56_04649 | P25185 | Negative | 4871194 - 4872522 | 45820.8 |
| succinyl-coa ligase subunit alpha | ALO56_04650 | Q51567 | Negative | 4872891 - 4873772 | 30004.5 |
| succinyl-coa ligase subunit beta | ALO56_01426 | Q883Z4 | Negative | 4873772 - 4874938 | 41228.8 |
| dihydrolipoyl dehydrogenase | ALO56_01427 | P31052 | Negative | 4875145 - 4876581 | 50105.6 |
| dihydrolipoamide succinyltransferase | ALO56_01428 | Q9I3D2 | Negative | 4876747 - 4877964 | 42368.1 |
| 2-oxoglutarate dehydrogenase e1 component | ALO56_04653 | P20707 | Negative | 4878006 - 4880837 | 106477.0 |
| succinate dehydrogenase iron-sulfur subunit | ALO56_01430 | P07014 | Negative | 4881098 - 4881802 | 26096.7 |
| succinate dehydrogenase flavoprotein subunit | ALO56_01431 | P0AC43 | Negative | 4881815 - 4883587 | 63401.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | ALO56_01432 | P51057 | Negative | 4883591 - 4883959 | 13765.1 |
| succinate dehydrogenase, cytochrome subunit | ALO56_01433 | P69055 | Negative | 4883953 - 4884339 | 13781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









