Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase sixa | ALO56_01415 | P44164 | Negative | 4860591 - 4861055 | 16807.0 |
| uncharacterized protein | ALO56_01416 | Not Available | Negative | 4861052 - 4861396 | 12718.4 |
| glycerol-3-phosphate dehydrogenase | ALO56_01417 | Q883Y4 | Negative | 4861422 - 4862447 | 36511.6 |
| response regulator receiver:atp-binding region | ALO56_04646 | P48027 | Positive | 4862563 - 4864659 | 77349.6 |
| 3-hydroxydecanoyl- dehydratase | ALO56_01419 | Q883Y6 | Positive | 4864880 - 4865395 | 18797.7 |
| 3-oxoacyl- synthase i | ALO56_01420 | Q02K94 | Positive | 4865406 - 4866623 | 42995.3 |
| pirin | ALO56_01421 | P58114 | Positive | 4866898 - 4867749 | 30716.7 |
| dienelactone hydrolase family protein | ALO56_100465 | Not Available | Negative | 4867771 - 4868505 | 26166.3 |
| chaperone protein htpg | ALO56_04648 | Q48K64 | Negative | 4868597 - 4870567 | 73844.8 |
| lipoprotein | ALO56_01423 | Not Available | Positive | 4870840 - 4871112 | 9492.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









