Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | ALO56_01406 | Not Available | Positive | 4846509 - 4847636 | 39581.4 |
| autotransporter | ALO56_01407 | P33924 | Negative | 4850216 - 4851598 | 46654.3 |
| uncharacterized protein | ALO56_01408 | Not Available | Negative | 4851970 - 4854018 | 74090.3 |
| dna-binding response regulator | ALO56_01409 | Not Available | Positive | 4854327 - 4855076 | 28496.3 |
| sensor histidine kinase | ALO56_01410 | Q9HZ47 | Positive | 4855073 - 4856128 | 39169.2 |
| lipoprotein | ALO56_01411 | P0AFS7 | Negative | 4856186 - 4857235 | 37923.5 |
| type iia topoisomerase, a subunit | ALO56_100107 | Q9I398 | Negative | 4857327 - 4858283 | 34462.1 |
| alpha/beta fold family hydrolase | ALO56_01412 | Q54M29 | Negative | 4858285 - 4859139 | 30561.1 |
| uncharacterized protein | ALO56_01413 | Not Available | Negative | 4859136 - 4859957 | 31087.5 |
| thioesterase | ALO56_01414 | Q9I3A4 | Negative | 4860088 - 4860531 | 15960.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









