Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yd repeat-containing protein | ALO56_00745 | B6A881 | Negative | 4835235 - 4837835 | 96785.6 |
| uncharacterized protein | ALO56_00746 | Not Available | Positive | 4838489 - 4840165 | 63483.2 |
| uncharacterized protein | ALO56_00747 | Not Available | Positive | 4840446 - 4840910 | 17097.6 |
| short chain dehydrogenase | ALO56_00748 | A0A5B8YU68 | Positive | 4840928 - 4841746 | 28710.6 |
| nucleoside-specific channel-forming protein tsx | ALO56_01914 | P0A262 | Positive | 4841874 - 4842755 | 32847.8 |
| purine nucleoside permease | ALO56_01915 | O74493 | Positive | 4842782 - 4843804 | 37513.5 |
| uncharacterized protein | ALO56_01916 | Not Available | Negative | 4843865 - 4844623 | 25281.2 |
| uncharacterized protein | ALO56_01917 | Not Available | Negative | 4844616 - 4845071 | 17153.5 |
| uncharacterized protein | ALO56_01918 | Not Available | Positive | 4845146 - 4845643 | 18641.3 |
| hypothetical protein | ALO56_01919 | Q48LR7 | Positive | 4845647 - 4846120 | 17155.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









