Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate biosynthesis protein alg44 | ALO56_00735 | Q887Q0 | Positive | 4821730 - 4822902 | 41967.4 |
| alginate biosynthesis protein algk | ALO56_00736 | Q887Q1 | Positive | 4822905 - 4824317 | 51006.4 |
| alginate biosynthesis protein alge | ALO56_00737 | Q887Q2 | Positive | 4824314 - 4825795 | 55090.4 |
| alginate biosynthesis protein algg | ALO56_00738 | Q887Q3 | Positive | 4825813 - 4827432 | 59833.6 |
| alginate biosynthesis protein algx | ALO56_00739 | Q887Q4 | Positive | 4827429 - 4828886 | 54166.0 |
| alginate lyase | ALO56_00740 | Q9L7P2 | Positive | 4828895 - 4830028 | 42479.6 |
| alginate biosynthesis protein algi | ALO56_00741 | Q887Q6 | Positive | 4830159 - 4831715 | 58475.3 |
| alginate biosynthesis protein algj | ALO56_04491 | Q887Q7 | Positive | 4831654 - 4832901 | 46083.2 |
| alginate biosynthesis protein algf | ALO56_00743 | Q887Q8 | Positive | 4832914 - 4833582 | 23453.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | ALO56_00744 | Q887Q9 | Positive | 4833699 - 4835150 | 53401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









