Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase | ALO56_00725 | Not Available | Positive | 4810369 - 4811028 | 24157.8 |
| atp-dependent rna helicase rhlb | ALO56_00726 | Q887N8 | Positive | 4811146 - 4812612 | 54284.3 |
| molybdopterin biosynthesis moae | ALO56_00727 | Q9HX97 | Negative | 4812734 - 4813183 | 16596.7 |
| molybdenum cofactor biosynthesis protein d | ALO56_00728 | P45309 | Negative | 4813186 - 4813431 | 9185.83 |
| cyclic pyranopterin monophosphate synthase accessory protein | ALO56_00729 | Q4ZXJ9 | Negative | 4813428 - 4813913 | 16966.9 |
| phoh family protein | ALO56_00730 | O07635 | Negative | 4814116 - 4815510 | 51885.3 |
| polysaccharide deacetylase | ALO56_00731 | Not Available | Negative | 4815806 - 4816990 | 44854.6 |
| hypothetical protein | ALO56_00732 | Q887P7 | Positive | 4817197 - 4817976 | 29428.2 |
| gdp-mannose 6-dehydrogenase | ALO56_00733 | O07299 | Positive | 4818793 - 4820109 | 47653.2 |
| alginate biosynthesis protein alg8 | ALO56_00734 | Q887P9 | Positive | 4820208 - 4821689 | 56047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









