Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase family protein | ALO56_01814 | Q48KB0 | Positive | 4799352 - 4800683 | 48618.2 |
| uncharacterized protein | ALO56_01815 | Not Available | Negative | 4801742 - 4802068 | 12002.2 |
| glutathione s-transferase | ALO56_00718 | Not Available | Negative | 4802406 - 4803338 | 33994.5 |
| giy-yig nuclease superfamily protein | ALO56_00719 | Q88P81 | Negative | 4803403 - 4803756 | 12758.5 |
| uncharacterized protein | ALO56_00720 | Not Available | Negative | 4803749 - 4804273 | 19756.2 |
| cyanate mfs transporter | ALO56_00721 | P76242 | Negative | 4804325 - 4805557 | 43110.0 |
| amino acid abc transporter atp-binding protein | ALO56_00722 | P45769 | Negative | 4805723 - 4806487 | 28871.5 |
| amino acid abc transporter permease | ALO56_101093 | P45768 | Negative | 4806498 - 4807595 | 40523.0 |
| amino acid abc transporter permease | ALO56_00723 | P45767 | Negative | 4807606 - 4808787 | 43364.2 |
| amino acid abc transporter substrate-binding protein | ALO56_00724 | P58068 | Negative | 4808858 - 4809886 | 36485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









