Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01734 | Not Available | Negative | 4783491 - 4783928 | 16543.9 |
| putative regulatory protein | ALO56_01735 | Not Available | Positive | 4784152 - 4785159 | 37523.8 |
| cupin | ALO56_01736 | Not Available | Positive | 4785219 - 4785710 | 17147.3 |
| carboxymuconolactone decarboxylase | ALO56_01737 | Not Available | Positive | 4785707 - 4786498 | 28476.2 |
| lysr family transcriptional regulator | ALO56_04703 | P75836 | Negative | 4786507 - 4787421 | 33400.5 |
| aldehyde oxidase and xanthine dehydrogenase family protein | ALO56_01739 | Q8X6J4 | Negative | 4787449 - 4787820 | 13095.9 |
| pyoverdine sidechain peptide synthetase ii, d-asp-l-thr component | ALO56_04753 | Q70LM6 | Positive | 4787834 - 4792648 | 178090.0 |
| tat pathway signal sequence domain-containing protein | ALO56_01811 | Not Available | Positive | 4792790 - 4794400 | 61495.8 |
| rnd efflux system, outer membrane lipoprotein, nodt | ALO56_01812 | P24145 | Negative | 4794614 - 4796002 | 50364.4 |
| macrolide export atp-binding/permease protein macb | ALO56_04730 | Q48KB2 | Negative | 4796014 - 4797981 | 69424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









