Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | ALO56_00579 | P76091 | Negative | 426889 - 427818 | 34158.8 |
| acyltransferase | ALO56_00580 | Not Available | Negative | 427818 - 428438 | 23013.9 |
| uncharacterized protein | ALO56_00581 | Not Available | Negative | 428447 - 428902 | 16992.3 |
| dual specificity phosphatase, catalytic domain-containing protein | ALO56_04458 | P76093 | Negative | 429177 - 430571 | 52282.1 |
| uncharacterized protein | ALO56_00583 | P76092 | Negative | 430529 - 432286 | 65280.1 |
| cdp-alcohol phosphatidyltransferase | ALO56_00584 | P76090 | Negative | 432320 - 432937 | 22190.8 |
| band 7 protein | ALO56_04461 | Not Available | Positive | 433179 - 434832 | 59584.5 |
| sensory box/ggdef domain/eal domain-containing protein | ALO56_04770 | Not Available | Positive | 435007 - 437799 | 104294.0 |
| peptide methionine sulfoxide reductase msra | ALO56_01920 | Q88AI5 | Positive | 437947 - 438594 | 23509.8 |
| uncharacterized protein | ALO56_00992 | Not Available | Positive | 438649 - 439102 | 16270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









