Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALO56_02063 | Not Available | Positive | 4755552 - 4757495 | 70105.7 |
| glucans biosynthesis glucosyltransferase h | ALO56_04807 | Q48PK6 | Negative | 4757809 - 4760406 | 97322.7 |
| glucans biosynthesis protein g | ALO56_02065 | Q87UY0 | Negative | 4760384 - 4762300 | 71029.9 |
| d-tyrosyl-trna deacylase | ALO56_02066 | Q48PK8 | Negative | 4762564 - 4763001 | 15361.7 |
| proline iminopeptidase | ALO56_02067 | Q9PD69 | Negative | 4763041 - 4764012 | 36591.4 |
| phosphorylase | ALO56_02068 | P0AC86 | Positive | 4764294 - 4766744 | 92038.8 |
| membrane protein | ALO56_02069 | Not Available | Positive | 4766976 - 4769831 | 103198.0 |
| uncharacterized protein | ALO56_02070 | Not Available | Positive | 4769869 - 4771206 | 48299.4 |
| fructose-1,6-bisphosphatase s 1 | ALO56_02071 | Q87UX4 | Positive | 4771352 - 4772362 | 37245.5 |
| uncharacterized protein | ALO56_02072 | Not Available | Positive | 4772377 - 4772979 | 23092.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









