Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02055 | Not Available | Negative | 4746804 - 4747082 | 10230.3 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | ALO56_02056 | Q48PJ4 | Positive | 4747227 - 4747997 | 28454.4 |
| sterol-binding domain-containing protein | ALO56_02057 | Not Available | Positive | 4747997 - 4748620 | 22881.3 |
| ubiquinone biosynthesis monooxygenase ubib | ALO56_100051 | Q87UZ0 | Positive | 4748617 - 4750236 | 62106.9 |
| phosphoribosyl-amp cyclohydrolase | ALO56_02058 | Q48PJ7 | Positive | 4750304 - 4750696 | 14920.8 |
| phosphoribosyl-atp pyrophosphatase | ALO56_02059 | Q48PJ8 | Positive | 4750699 - 4751031 | 11909.0 |
| sec-independent protein translocase protein tata | ALO56_02060 | Q48PJ9 | Positive | 4751079 - 4751372 | 10788.8 |
| sec-independent protein translocase protein tatb | ALO56_02061 | Q48PK0 | Positive | 4751377 - 4751832 | 16387.6 |
| sec-independent protein translocase protein tatc | ALO56_100083 | P54085 | Positive | 4751688 - 4752629 | 35042.4 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO56_02062 | Not Available | Positive | 4753428 - 4755344 | 68255.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









