Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin, oprd family protein | ALO56_02087 | Not Available | Positive | 4710819 - 4712198 | 50556.2 |
| dipeptide abc transporter substrate-binding protein | ALO56_02088 | A0A0H2ZGV7 | Positive | 4712265 - 4713860 | 59051.3 |
| peptide abc transporter permease | ALO56_02089 | A0A0H2ZGW7 | Positive | 4713932 - 4714942 | 36918.3 |
| dipeptide abc transporter permease | ALO56_02090 | Not Available | Positive | 4714953 - 4715864 | 32609.9 |
| oligopeptide/dipeptide abc transporter atp-binding protein-like protein | ALO56_02091 | A0A0H2ZGN6 | Positive | 4715875 - 4716843 | 34672.5 |
| dipeptide transporter atp-binding subunit | ALO56_02092 | A0A0H2ZH52 | Positive | 4716843 - 4717817 | 35784.4 |
| sulfite reductase flavoprotein, alpha-component | ALO56_04813 | A0KTH4 | Negative | 4718029 - 4720569 | 93244.9 |
| putative outer membrane ferric siderophore receptor | ALO56_02094 | P81549 | Negative | 4720715 - 4722967 | 81338.5 |
| pkhd-type hydroxylase | ALO56_02095 | Q3KI64 | Positive | 4723181 - 4723861 | 25596.3 |
| sel1 domain-containing protein | ALO56_02096 | Not Available | Positive | 4723864 - 4724661 | 29037.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









