Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactonate transporter | ALO56_04810 | P42237 | Negative | 4696688 - 4698085 | 50431.2 |
| putative 5-dehydro-4-deoxyglucarate dehydratase | ALO56_02079 | Q87WJ7 | Negative | 4698236 - 4699147 | 32680.3 |
| putative gntr family d-glucarate/d-galactorate regulator | ALO56_100136 | P42239 | Negative | 4699735 - 4700493 | 28161.3 |
| abc transporter atp-binding protein | ALO56_04811 | Q6NLC1 | Negative | 4700585 - 4702363 | 67255.9 |
| fis family transcriptional regulator | ALO56_02081 | O82868 | Negative | 4702408 - 4702971 | 20788.1 |
| sensor histidine kinase | ALO56_02082 | P0C0Z0 | Negative | 4702968 - 4704227 | 46581.7 |
| uncharacterized protein | ALO56_02083 | Not Available | Positive | 4704420 - 4705136 | 25691.7 |
| phca | ALO56_02084 | Not Available | Positive | 4705518 - 4707065 | 57616.8 |
| peptide abc transporter, periplasmic peptide-binding protein | ALO56_02085 | A0A0H2ZGV2 | Positive | 4707172 - 4708773 | 59656.8 |
| abc-type dipeptide transport system, periplasmic component | ALO56_02086 | Not Available | Positive | 4709038 - 4710663 | 60632.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









