Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf family rna polymerase sigma factor | ALO56_01010 | Not Available | Negative | 4682347 - 4682859 | 18826.3 |
| aldehyde dehydrogenase | ALO56_01011 | O32507 | Negative | 4683015 - 4684640 | 60105.3 |
| Trna-asn | Not Available | Not Available | Positive | 4684814 - 4684889 | Not Available |
| uncharacterized protein | ALO56_01012 | Not Available | Positive | 4686883 - 4687155 | 9809.79 |
| major facilitator superfamily protein | ALO56_01013 | Not Available | Positive | 4687177 - 4688442 | 46439.7 |
| uncharacterized protein | ALO56_01014 | P18205 | Positive | 4688644 - 4690005 | 47924.0 |
| tetr family transcriptional regulator | ALO56_01015 | Not Available | Positive | 4690038 - 4690688 | 24304.1 |
| glycoside hydrolase family protein | ALO56_01016 | Not Available | Negative | 4690704 - 4693451 | 98665.3 |
| uncharacterized protein | ALO56_01017 | Not Available | Positive | 4694302 - 4694637 | 12074.6 |
| galactarate dehydrogenase | ALO56_02077 | P42240 | Negative | 4695124 - 4696680 | 56116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









