Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide/dipeptide abc transporter atp-binding protein | ALO56_100903 | P77622 | Positive | 4652737 - 4653729 | 36167.6 |
| uncharacterized protein | ALO56_01486 | O27346 | Positive | 4653747 - 4654208 | 17483.2 |
| hypothetical protein | ALO56_200189 | P37327 | Negative | 4654406 - 4654660 | 9638.47 |
| uncharacterized protein | ALO56_00502 | Not Available | Negative | 4654833 - 4655288 | 17078.8 |
| penicillin-binding protein 1a | ALO56_04436 | Q07806 | Negative | 4655685 - 4658156 | 90528.6 |
| type iv pilus assembly protein pilm | ALO56_00504 | G3XD28 | Positive | 4658336 - 4659400 | 38033.7 |
| peptidase m16 domain-containing protein | ALO56_05243 | Not Available | Negative | 4661585 - 4664797 | 120720.0 |
| tonb dependent outermembrane receptor | ALO56_05244 | P31827 | Negative | 4664452 - 4667283 | 105477.0 |
| uncharacterized protein | ALO56_00999 | B5FNT6 | Positive | 4667617 - 4668330 | 25736.9 |
| pap2 superfamily protein | ALO56_01000 | Not Available | Positive | 4668327 - 4669166 | 31908.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









