Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter transmembrane protein | ALO56_04665 | Not Available | Negative | 4640195 - 4642054 | 67834.4 |
| amidase | ALO56_01477 | Q2IH94 | Negative | 4642503 - 4644209 | 60270.4 |
| enda | ALO56_01478 | P25736 | Negative | 4644265 - 4645242 | 36490.0 |
| transcriptional regulator | ALO56_01479 | Not Available | Negative | 4645310 - 4645726 | 15808.0 |
| uncharacterized protein | ALO56_01480 | Not Available | Positive | 4646493 - 4647359 | 32301.4 |
| d-alanyl-d-alanine dipeptidase | ALO56_01481 | P77790 | Positive | 4647399 - 4647956 | 20728.4 |
| dipeptide abc transporter periplasmic protein | ALO56_01482 | P76128 | Positive | 4648115 - 4649671 | 56614.0 |
| oligopeptide/dipeptide abc transporter permease | ALO56_01483 | P77308 | Positive | 4649699 - 4650802 | 40239.0 |
| d-ala-d-ala transporter subunit | ALO56_01484 | P77463 | Positive | 4650804 - 4651703 | 32235.1 |
| oligopeptide/dipeptide abc transporter atp-binding protein | ALO56_01485 | P77268 | Positive | 4651700 - 4652740 | 37891.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









