Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00221 | Not Available | Positive | 5475635 - 5476084 | 15934.0 |
| Putative tail protein | ALO56_00222 | Not Available | Negative | 5476262 - 5477107 | 30088.1 |
| Tail length tape measure protein | ALO56_00223 | Not Available | Negative | 5477117 - 5479873 | 94359.7 |
| Hypothetical protein | ALO56_00224 | Not Available | Negative | 5480009 - 5480311 | 11134.1 |
| Tail protein | ALO56_00225 | P85988 | Negative | 5480327 - 5480836 | 18500.5 |
| Putative phage tail protein | ALO56_00226 | Q02TE1 | Negative | 5480849 - 5481163 | 11885.1 |
| Tail sheath protein | ALO56_00227 | Not Available | Negative | 5481196 - 5481972 | 26842.0 |
| Tail fiber protein | ALO56_00228 | P26700 | Negative | 5482503 - 5483801 | 43538.5 |
| Tail protein i | ALO56_00229 | P26701 | Negative | 5483798 - 5484403 | 22240.5 |
| Baseplate assembly protein | ALO56_00230 | P51767 | Negative | 5484405 - 5485286 | 32015.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









