Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mg chelatase-like protein | ALO56_03050 | P45049 | Positive | 4625573 - 4627066 | 53008.9 |
| uncharacterized protein | ALO56_03051 | Not Available | Positive | 4627653 - 4628330 | 26053.0 |
| methyl-accepting chemotaxis protein | ALO56_04984 | Q88NI1 | Negative | 4628421 - 4630427 | 71406.7 |
| regulatory protein lysr | ALO56_04985 | Not Available | Negative | 4630579 - 4631541 | 36215.8 |
| multidrug efflux protein nora | ALO56_03054 | Q88BA2 | Positive | 4631656 - 4633038 | 48901.5 |
| diguanylate cye | ALO56_03055 | Q9HYT3 | Negative | 4633042 - 4634715 | 62136.7 |
| atp-dependent dna helicase rep | ALO56_03056 | Q9L6S1 | Positive | 4634861 - 4636930 | 78779.4 |
| xanthine phosphoribosyltransferase | ALO56_03057 | Q48QC3 | Positive | 4636982 - 4637551 | 20187.5 |
| helix-turn-helix, fis-type | ALO56_03058 | Not Available | Negative | 4637558 - 4638877 | 48499.4 |
| lysr family transcriptional regulator | ALO56_01475 | Not Available | Positive | 4639151 - 4640104 | 35641.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









