Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrpw-specific chaperone | ALO56_01522 | Not Available | Positive | 4606219 - 4606575 | 13023.4 |
| glutathione s-transferase domain-containing protein | ALO56_03034 | P82998 | Negative | 4606972 - 4607637 | 24604.9 |
| uncharacterized protein | ALO56_03035 | Not Available | Positive | 4607827 - 4608108 | 10460.3 |
| uncharacterized protein | ALO56_03036 | Not Available | Positive | 4608326 - 4608574 | 8689.45 |
| adenylate cye | ALO56_03037 | Q59685 | Positive | 4608761 - 4611607 | 108776.0 |
| nucleoside diphosphate kinase regulator | ALO56_03038 | P0AFW6 | Negative | 4611726 - 4612235 | 18343.7 |
| mutt/nudix family protein | ALO56_100220 | Q88B06 | Negative | 4612272 - 4612838 | 21249.6 |
| lipoprotein lppl | ALO56_03039 | Not Available | Positive | 4613077 - 4613226 | 5217.34 |
| diaminopimelate decarboxylase | ALO56_03040 | O05321 | Positive | 4613236 - 4614483 | 45405.2 |
| diaminopimelate epimerase | ALO56_03041 | Q88B09 | Positive | 4614488 - 4615318 | 30316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









