Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03857 | Not Available | Positive | 4580754 - 4582373 | 57410.9 |
| flhb domain-containing protein | ALO56_03858 | Not Available | Positive | 4582373 - 4582696 | 11960.1 |
| recombination protein recr | ALO56_05129 | Q48GK6 | Negative | 4582727 - 4583329 | 21492.2 |
| lysr family transcriptional regulator | ALO56_03860 | Not Available | Negative | 4583609 - 4584493 | 32989.0 |
| uncharacterized protein | ALO56_03861 | B2DFG5 | Positive | 4584589 - 4585740 | 41530.6 |
| aldehyde dehydrogenase | ALO56_03862 | H8ZPX2 | Positive | 4586218 - 4587753 | 53777.5 |
| uncharacterized protein | ALO56_04150 | Not Available | Positive | 4588038 - 4588299 | 9420.37 |
| penicillin amidase | ALO56_04623 | P15558 | Negative | 4589724 - 4591843 | 78707.9 |
| lysophospholipase | ALO56_100309 | Not Available | Positive | 4591859 - 4592989 | 41768.3 |
| hypothetical protein | ALO56_100257 | Not Available | Negative | 4593206 - 4593964 | 27440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









