Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate-binding protein | ALO56_03847 | Q9I3L9 | Positive | 4572103 - 4573101 | 36743.5 |
| lipoprotein | ALO56_03848 | Not Available | Negative | 4573160 - 4573567 | 14377.8 |
| cytochrome c-type bioproteinsis protein | ALO56_03849 | Q9I3M9 | Negative | 4573595 - 4574788 | 43106.8 |
| cytochrome c-type bioproteinsis protein cycl | ALO56_03850 | P52226 | Negative | 4574785 - 4575261 | 17911.7 |
| periplasmic protein thiol:disulfide oxidoreductase dsbe | ALO56_03851 | P52237 | Negative | 4575258 - 4575794 | 20146.5 |
| cytochrome c-type bioproteinsis protein ccmf | ALO56_05128 | P52225 | Negative | 4575791 - 4577767 | 71704.9 |
| cytochrome c-type bioproteinsis protein ccme | ALO56_03853 | Q4ZR01 | Negative | 4577764 - 4578234 | 16789.3 |
| heme exporter protein ccmd | ALO56_03854 | Q9I3N4 | Negative | 4578231 - 4578407 | 6760.4 |
| heme exporter protein ccmc | ALO56_03855 | Q9I3N5 | Negative | 4578404 - 4579201 | 29313.7 |
| heme exporter protein b | ALO56_03856 | Q9I3N6 | Negative | 4579254 - 4579925 | 23206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









