Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03838 | G8QM62 | Negative | 4561044 - 4561664 | 23166.2 |
| uncharacterized protein | ALO56_05127 | Not Available | Negative | 4561751 - 4562590 | 29083.8 |
| dna-binding heavy metal response regulator | ALO56_03840 | Not Available | Positive | 4562524 - 4563219 | 26577.3 |
| signal transduction histidine kinase | ALO56_100463 | Q44007 | Positive | 4563192 - 4564586 | 51436.2 |
| alginate lyase | ALO56_03841 | Not Available | Negative | 4564605 - 4565300 | 25782.3 |
| marr family transcriptional regulator | ALO56_03842 | Not Available | Positive | 4565805 - 4566266 | 16379.6 |
| fusaric acid resistance protein region | ALO56_03843 | Not Available | Positive | 4566263 - 4568350 | 77964.3 |
| putative membrane protein | ALO56_03844 | Not Available | Positive | 4568347 - 4568556 | 7760.85 |
| nodt family outer membrane efflux lipoprotein | ALO56_03845 | Not Available | Positive | 4569434 - 4570867 | 51630.2 |
| ion transport protein | ALO56_03846 | Q02006 | Positive | 4571169 - 4572002 | 31091.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









