Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00435 | Q48EU3 | Negative | 4551318 - 4551710 | 15407.7 |
| uncharacterized protein | ALO56_00436 | Q0TDV3 | Positive | 4551716 - 4552663 | 34261.0 |
| uncharacterized protein | ALO56_00438 | Not Available | Positive | 4552772 - 4553593 | 30551.0 |
| sensor histidine kinase tcte | ALO56_00440 | O69729 | Negative | 4553587 - 4554249 | 23699.3 |
| beta-lactamase/d-alanine carboxypeptidase | ALO56_03832 | P85302 | Positive | 4554250 - 4554892 | 23535.4 |
| membrane protein | ALO56_03833 | Q1C8M3 | Positive | 4555825 - 4556679 | 30553.8 |
| uncharacterized protein | ALO56_03834 | Q1C8M2 | Positive | 4556688 - 4557896 | 43145.2 |
| dyp-type peroxidase family protein | ALO56_03835 | Q0T616 | Positive | 4557937 - 4559247 | 47530.2 |
| iron abc transporter substrate-binding protein | ALO56_03836 | Q66BP5 | Positive | 4559244 - 4560101 | 31488.4 |
| oxidoreductase, molybdopterin binding protein | ALO56_03837 | G8QM63 | Negative | 4560277 - 4561047 | 29234.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









