Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00416 | Not Available | Negative | 4541603 - 4541986 | 14434.6 |
| signal peptidase i | ALO56_00418 | P26844 | Negative | 4542072 - 4542926 | 32118.1 |
| elongation factor 4 | ALO56_00420 | Q4ZPD8 | Negative | 4542936 - 4544732 | 66311.3 |
| peptidase s1, chymotrypsin:pdz/dhr/glgf | ALO56_00422 | Q48EU9 | Negative | 4544904 - 4546508 | 56625.6 |
| sigma e regulatory protein mucb/rseb | ALO56_00426 | P38108 | Negative | 4546622 - 4547578 | 34561.3 |
| sigma factor algu negative regulatory protein muca | ALO56_00427 | P38107 | Negative | 4547587 - 4548180 | 20994.9 |
| rna polymerase sigma factor | ALO56_00429 | Q06198 | Negative | 4548214 - 4548801 | 22530.7 |
| unknown protein sequence | ALO56_00431 | Not Available | Negative | 4548743 - 4548991 | 9044.68 |
| l-aspartate oxidase | ALO56_00432 | Q51363 | Positive | 4549123 - 4550901 | 65912.2 |
| unknown protein sequence | ALO56_00434 | Not Available | Positive | 4550958 - 4551179 | 8192.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









