Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02460 | Not Available | Negative | 4531947 - 4532609 | 24629.3 |
| putative periplasmic ligand-binding sensor protein | ALO56_02461 | Q89AS2 | Positive | 4532803 - 4533498 | 24300.7 |
| uncharacterized protein | ALO56_01863 | P38942 | Positive | 4533846 - 4535768 | 71467.3 |
| uncharacterized protein | ALO56_00400 | Not Available | Positive | 4536108 - 4536500 | 13930.8 |
| trna -methyltransferase | ALO56_00402 | Q48EV8 | Positive | 4536556 - 4537356 | 29630.8 |
| trna -methyltransferase | ALO56_00405 | Q87XG5 | Positive | 4537353 - 4538312 | 36240.8 |
| pyridoxine 5'-phosphate synthase | ALO56_00406 | Q87XG4 | Negative | 4538489 - 4539271 | 28181.1 |
| dna repair protein reco | ALO56_00410 | Q4ZPE3 | Negative | 4539281 - 4539964 | 24926.3 |
| gtpase era | ALO56_00412 | Q48EV4 | Negative | 4540022 - 4540924 | 33864.9 |
| ribonuclease 3 | ALO56_00413 | Q87XG1 | Negative | 4540917 - 4541666 | 27860.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









