Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | ALO56_03238 | Q9HYH1 | Positive | 399714 - 400097 | 13488.1 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO56_03239 | P51660 | Positive | 400198 - 401121 | 32871.9 |
| uncharacterized protein | ALO56_03240 | Not Available | Positive | 401364 - 401921 | 20806.2 |
| uncharacterized protein | ALO56_05005 | Q9HYI6 | Negative | 402135 - 402938 | 30319.9 |
| leucine dehydrogenase | ALO56_03242 | Q53560 | Positive | 403102 - 404121 | 35752.1 |
| uncharacterized protein | ALO56_03243 | Not Available | Negative | 404166 - 405038 | 31560.1 |
| peptidase aspartic, active site | ALO56_03244 | Not Available | Negative | 405073 - 407037 | 72688.3 |
| bacteriophage n4 adsorption protein b | ALO56_05009 | P0AFA6 | Negative | 407034 - 409154 | 81209.6 |
| bacterial cellulose synthase-like protein | ALO56_100089 | Not Available | Negative | 409167 - 411392 | 78928.9 |
| udp-n-acetylglucosamine 2-epimerase | ALO56_03246 | Q8XAR8 | Negative | 411523 - 412761 | 45730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









